U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FUCA2 alpha-L-fucosidase 2 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128906606, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
See related
EnsemblRapid:ENSRTRG00005015487
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FUCA2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 3 NC_071468.1 (60773176..60784115)

Chromosome 3 - NC_071468.1Genomic Context describing neighboring genes Neighboring gene LTV1 ribosome biogenesis factor Neighboring gene phosphatase and actin regulator 2 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene adenosine deaminase tRNA specific 2 Neighboring gene androgen induced 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_071468.1 Chromosome 3 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
plasma alpha-L-fucosidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071468.1 Reference bRisTri1.patW.cur.20221130

    Range
    60773176..60784115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054194083.1 → XP_054050058.1  plasma alpha-L-fucosidase isoform X1

    Related
    ENSRTRP00005019625.1, ENSRTRT00005021549.1

  2. XM_054194084.1 → XP_054050059.1  plasma alpha-L-fucosidase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.