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LCLAT1 lysocardiolipin acyltransferase 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128906596, updated on 3-Aug-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
See related
EnsemblRapid:ENSRTRG00005006545
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 3 NC_071468.1 (14834469..14952910)

Chromosome 3 - NC_071468.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128906991 Neighboring gene LBH regulator of WNT signaling pathway Neighboring gene uncharacterized LOC128907731 Neighboring gene calpain-13-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071468.1 Chromosome 3 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071468.1 Reference bRisTri1.patW.cur.20221130

    Range
    14834469..14952910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054194060.1 → XP_054050035.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    A0A7L3T2A7

  2. XM_054194059.1 → XP_054050034.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    A0A7L3T2A7
    Related
    ENSRTRP00005008497.1, ENSRTRT00005009111.1

  3. XM_054194058.1 → XP_054050033.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    A0A7L3T2A7
Nucleotide Protein
Heading Accession and Version

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