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B4GALT6 beta-1,4-galactosyltransferase 6 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128906324, updated on 3-Aug-2024

Summary

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Gene symbol
B4GALT6
Gene description
beta-1,4-galactosyltransferase 6
See related
EnsemblRapid:ENSRTRG00005006335
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See B4GALT6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 2 NC_071467.1 (48248756..48283226)

Chromosome 2 - NC_071467.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene opsin-5-like Neighboring gene transthyretin-like Neighboring gene transthyretin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071467.1 Chromosome 2 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071467.1 Reference bRisTri1.patW.cur.20221130

    Range
    48248756..48283226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054193418.1 → XP_054049393.1  beta-1,4-galactosyltransferase 6 isoform X2

  2. XM_054193419.1 → XP_054049394.1  beta-1,4-galactosyltransferase 6 isoform X3

  3. XM_054193420.1 → XP_054049395.1  beta-1,4-galactosyltransferase 6 isoform X4

  4. XM_054193417.1 → XP_054049392.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A7L3SLK5
    Related
    ENSRTRP00005008214.1, ENSRTRT00005008808.1
Nucleotide Protein
Heading Accession and Version

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