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GMDS GDP-mannose 4,6-dehydratase [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128905010, updated on 3-Aug-2024

Summary

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Gene symbol
GMDS
Gene description
GDP-mannose 4,6-dehydratase
See related
EnsemblRapid:ENSRTRG00005001566
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See GMDS in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 2 NC_071467.1 (90744076..91171652)

Chromosome 2 - NC_071467.1Genomic Context describing neighboring genes Neighboring gene leukocyte elastase inhibitor-like Neighboring gene WRN helicase interacting protein 1 Neighboring gene myosin light chain kinase family member 4 Neighboring gene forkhead box C1 Neighboring gene forkhead box F2 Neighboring gene forkhead box Q1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071467.1 Chromosome 2 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-mannose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-mannose 4,6 dehydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071467.1 Reference bRisTri1.patW.cur.20221130

    Range
    90744076..91171652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054190299.1 → XP_054046274.1  GDP-mannose 4,6 dehydratase isoform X1

    Related
    ENSRTRP00005002003.1, ENSRTRT00005002132.1

  2. XM_054190301.1 → XP_054046276.1  GDP-mannose 4,6 dehydratase isoform X3

  3. XM_054190300.1 → XP_054046275.1  GDP-mannose 4,6 dehydratase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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