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LOC128904169 regucalcin [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128904169, updated on 3-Aug-2024

Summary

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Gene symbol
LOC128904169
Gene description
regucalcin
See related
EnsemblRapid:ENSRTRG00005012890
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
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Genomic context

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See LOC128904169 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 1 NC_071466.1 (76682204..76697125)

Chromosome 1 - NC_071466.1Genomic Context describing neighboring genes Neighboring gene RP2 activator of ARL3 GTPase Neighboring gene jade family PHD finger 3 Neighboring gene regucalcin-like Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 1 Neighboring gene GTP binding protein 6 (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071466.1 Chromosome 1 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regucalcin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071466.1 Reference bRisTri1.patW.cur.20221130

    Range
    76682204..76697125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054188121.1 → XP_054044096.1  regucalcin

    UniProtKB/TrEMBL
    A0A7L3SQM4
    Related
    ENSRTRP00005016616.1, ENSRTRT00005018037.1
Nucleotide Protein
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