U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC128688950 irregular chiasm C-roughest protein-like [ Cherax quadricarinatus ]

Gene ID: 128688950, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC128688950
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC128688950
Gene type
protein coding
RefSeq status
MODEL
Organism
Cherax quadricarinatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC128688950 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM2687515v2 (GCF_026875155.1) 20 NC_069418.1 (30845640..31061426, complement)

Chromosome 20 - NC_069418.1Genomic Context describing neighboring genes Neighboring gene protein O-mannosyl-transferase TMTC1-like Neighboring gene protein O-mannosyl-transferase TMTC2-like Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC128688951

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_069418.1 Chromosome 20 Reference ASM2687515v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_026875155.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2687515v2 Primary Assembly

Genomic

  1. NC_069418.1 Reference ASM2687515v2 Primary Assembly

    Range
    30845640..31061426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053777016.1 → XP_053632991.1  LOW QUALITY PROTEIN: irregular chiasm C-roughest protein-like

    Related
    XP_053632991.1, XM_053777016.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases