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rt Protein O-mannosyltransferase rt [ Cherax quadricarinatus ]

Gene ID: 128687712, updated on 3-Jul-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
See related
EnsemblRapid:LOC128687712
Gene type
protein coding
RefSeq status
MODEL
Organism
Cherax quadricarinatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM2687515v2 (GCF_026875155.1) 2 NC_069400.1 (36410520..36575082, complement)

Chromosome 2 - NC_069400.1Genomic Context describing neighboring genes Neighboring gene lachesin-like Neighboring gene upstream stimulatory factor 2-like Neighboring gene U6atac minor spliceosomal RNA Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene transfer RNA leucine (anticodon AAG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069400.1 Chromosome 2 Reference ASM2687515v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026875155.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2687515v2 Primary Assembly

Genomic

  1. NC_069400.1 Reference ASM2687515v2 Primary Assembly

    Range
    36410520..36575082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053775322.1 → XP_053631297.1  protein O-mannosyltransferase 1-like isoform X2

    Related
    XP_053631297.1, XM_053775322.1

  2. XM_053775319.1 → XP_053631294.1  protein O-mannosyltransferase 1-like isoform X1

    Related
    XP_053631294.1, XM_053775319.1
Nucleotide Protein
Heading Accession and Version

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