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LOC128687658 heparan sulfate 2-O-sulfotransferase 1-like [ Cherax quadricarinatus ]

Gene ID: 128687658, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128687658
Gene description
heparan sulfate 2-O-sulfotransferase 1-like
See related
EnsemblRapid:LOC128687658
Gene type
protein coding
RefSeq status
MODEL
Organism
Cherax quadricarinatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax
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Genomic context

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See LOC128687658 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM2687515v2 (GCF_026875155.1) 16 NC_069414.1 (45033450..45137457)

Chromosome 16 - NC_069414.1Genomic Context describing neighboring genes Neighboring gene protein flightless-1-like Neighboring gene solute carrier family 66 member 2-like Neighboring gene uncharacterized LOC128687490 Neighboring gene uncharacterized LOC128687659 Neighboring gene protein flightless-1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069414.1 Chromosome 16 Reference ASM2687515v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026875155.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2687515v2 Primary Assembly

Genomic

  1. NC_069414.1 Reference ASM2687515v2 Primary Assembly

    Range
    45033450..45137457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053775237.1 → XP_053631212.1  heparan sulfate 2-O-sulfotransferase 1-like

    Related
    XP_053631212.1, XM_053775237.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases