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LOC128686572 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Cherax quadricarinatus ]

Gene ID: 128686572, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128686572
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
See related
EnsemblRapid:LOC128686572
Gene type
protein coding
RefSeq status
MODEL
Organism
Cherax quadricarinatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax
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Genomic context

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See LOC128686572 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM2687515v2 (GCF_026875155.1) 13 NC_069411.1 (240418..276000)

Chromosome 13 - NC_069411.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128686586 Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like Neighboring gene protein Star-like Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069411.1 Chromosome 13 Reference ASM2687515v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026875155.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2687515v2 Primary Assembly

Genomic

  1. NC_069411.1 Reference ASM2687515v2 Primary Assembly

    Range
    240418..276000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053773508.1 → XP_053629483.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

    Related
    XP_053629483.1, XM_053773508.1
Nucleotide Protein
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