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b3galt1a UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1a [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128615898, updated on 10-Jul-2024

Summary

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Gene symbol
b3galt1a
Gene description
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1a
See related
EnsemblRapid:ENSIFRG00005030214
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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See b3galt1a in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 12 NC_071266.1 (9850014..9852771, complement)

Chromosome 12 - NC_071266.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate b Neighboring gene ATPase copper transporting beta Neighboring gene xin actin binding repeat containing 2a Neighboring gene sodium channel, voltage-gated, type I like, alpha b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071266.1 Chromosome 12 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071266.1 Reference Billie_1.0 Primary Assembly

    Range
    9850014..9852771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053638285.1 → XP_053494260.1  beta-1,3-galactosyltransferase 1

    Related
    ENSIFRP00005061962.1, ENSIFRT00005076601.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases