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zgc:154054 Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128611932, updated on 10-Jul-2024

Summary

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Gene symbol
zgc:154054
Gene description
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like
See related
EnsemblRapid:ENSIFRG00005007087
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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See zgc:154054 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 8 NC_071262.1 (27059653..27092605)

Chromosome 8 - NC_071262.1Genomic Context describing neighboring genes Neighboring gene skin secretory protein xP2-like Neighboring gene matrix metalloproteinase-17-like Neighboring gene uncharacterized LOC128611931 Neighboring gene uncharacterized LOC128611934 Neighboring gene uncharacterized LOC128611935 Neighboring gene short coiled-coil protein b Neighboring gene SET domain containing 7, histone lysine methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071262.1 Chromosome 8 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071262.1 Reference Billie_1.0 Primary Assembly

    Range
    27059653..27092605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053631813.1 → XP_053487788.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X2

    Related
    ENSIFRP00005017595.1, ENSIFRT00005018775.1

  2. XM_053631812.1 → XP_053487787.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1

  3. XM_053631814.1 → XP_053487789.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X3

RNA

  1. XR_008386643.1 RNA Sequence

  2. XR_008386644.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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