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c1galt1c1 C1GALT1-specific chaperone 1 [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128611169, updated on 10-Jul-2024

Summary

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Gene symbol
c1galt1c1
Gene description
C1GALT1-specific chaperone 1
See related
EnsemblRapid:ENSIFRG00005006402
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
C1GLC
Orthologs
human zebrafish all
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Genomic context

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See c1galt1c1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 8 NC_071262.1 (7932780..7935855)

Chromosome 8 - NC_071262.1Genomic Context describing neighboring genes Neighboring gene SAM and SH3 domain containing 3 Neighboring gene zinc finger DHHC-type palmitoyltransferase 9 Neighboring gene MCTS1 re-initiation and release factor Neighboring gene cullin 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071262.1 Chromosome 8 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071262.1 Reference Billie_1.0 Primary Assembly

    Range
    7932780..7935855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053630489.1 → XP_053486464.1  C1GALT1-specific chaperone 1

    Related
    ENSIFRP00005015623.1, ENSIFRT00005016799.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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