U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ano5b anoctamin 5b [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128602774, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
ano5b
Gene description
anoctamin 5b
See related
EnsemblRapid:ENSIFRG00005018862
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ano5b in Genome Data Viewer
Location:
chromosome: 27
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 27 NC_071281.1 (13015530..13050190)

Chromosome 27 - NC_071281.1Genomic Context describing neighboring genes Neighboring gene plakophilin 3b Neighboring gene anoctamin 9b Neighboring gene tumor suppressing subtransferable candidate 4 Neighboring gene solute carrier family 17 member 6b Neighboring gene growth arrest-specific 2b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_071281.1 Chromosome 27 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
anoctamin-5b

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071281.1 Reference Billie_1.0 Primary Assembly

    Range
    13015530..13050190
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053616800.1 → XP_053472775.1  anoctamin-5b

    Related
    ENSIFRP00005049866.1, ENSIFRT00005055123.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases