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si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 3A1 [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128602191, updated on 25-Mar-2024

Summary

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Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 26 NC_071280.1 (9327984..9354171)

Chromosome 26 - NC_071280.1Genomic Context describing neighboring genes Neighboring gene embryonic ectoderm development Neighboring gene heat shock protein nuclear import factor hikeshi Neighboring gene T-cell-specific surface glycoprotein CD28 Neighboring gene cholecystokinin B receptor a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071280.1 Chromosome 26 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071280.1 Reference Billie_1.0 Primary Assembly

    Range
    9327984..9354171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053615826.1 → XP_053471801.1  heparan sulfate glucosamine 3-O-sulfotransferase 3A1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases