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acbd7 acyl-CoA binding domain containing 7 [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128599576, updated on 10-Jul-2024

Summary

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Gene symbol
acbd7
Gene description
acyl-CoA binding domain containing 7
See related
EnsemblRapid:ENSIFRG00005030946
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See acbd7 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 23 NC_071277.1 (16256457..16260906, complement)

Chromosome 23 - NC_071277.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 4 Neighboring gene carnitine O-octanoyltransferase Neighboring gene ribonuclease P/MRP 38 subunit Neighboring gene N-myristoyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071277.1 Chromosome 23 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA-binding domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071277.1 Reference Billie_1.0 Primary Assembly

    Range
    16256457..16260906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053611317.1 → XP_053467292.1  acyl-CoA-binding domain-containing protein 7 isoform X3

    Related
    ENSIFRP00005062790.1, ENSIFRT00005078101.1

  2. XM_053611312.1 → XP_053467287.1  acyl-CoA-binding domain-containing protein 7 isoform X1

  3. XM_053611316.1 → XP_053467291.1  acyl-CoA-binding domain-containing protein 7 isoform X2

  4. XM_053611314.1 → XP_053467289.1  acyl-CoA-binding domain-containing protein 7 isoform X2

  5. XM_053611315.1 → XP_053467290.1  acyl-CoA-binding domain-containing protein 7 isoform X2

  6. XM_053611313.1 → XP_053467288.1  acyl-CoA-binding domain-containing protein 7 isoform X2

    Related
    ENSIFRP00005062788.1, ENSIFRT00005078099.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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