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sfrp1a secreted frizzled-related protein 1a [ Ictalurus furcatus (blue catfish) ]

Gene ID: 128599046, updated on 10-Jul-2024

Summary

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Gene symbol
sfrp1a
Gene description
secreted frizzled-related protein 1a
See related
EnsemblRapid:ENSIFRG00005005689
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus furcatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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See sfrp1a in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Billie_1.0 (GCF_023375685.1) 22 NC_071276.1 (3032584..3045414, complement)

Chromosome 22 - NC_071276.1Genomic Context describing neighboring genes Neighboring gene transcriptional and immune response regulator a Neighboring gene zinc finger, matrin-type 4a Neighboring gene lysyl oxidase-like 2b Neighboring gene histone H1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071276.1 Chromosome 22 Reference Billie_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Billie_1.0 Primary Assembly

Genomic

  1. NC_071276.1 Reference Billie_1.0 Primary Assembly

    Range
    3032584..3045414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053610397.1 → XP_053466372.1  secreted frizzled-related protein 1a

    Related
    ENSIFRP00005013622.1, ENSIFRT00005014703.1
Nucleotide Protein Strain
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