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angpt1 angiopoietin 1 [ Pleuronectes platessa (European plaice) ]

Gene ID: 128461242, updated on 25-Mar-2024

Summary

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Gene symbol
angpt1
Gene description
angiopoietin 1
See related
EnsemblRapid:ENSOESG00000027479
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
Orthologs
human zebrafish all
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Genomic context

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See angpt1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 18 NC_070643.1 (18645579..18696014, complement)

Chromosome 18 - NC_070643.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 12 Neighboring gene actin binding Rho activating protein b Neighboring gene uncharacterized LOC128461240 Neighboring gene syndecan 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070643.1 Chromosome 18 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Tie signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angiopoietin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070643.1 Reference fPlePla1.1

    Range
    18645579..18696014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053446074.1 → XP_053302049.1  angiopoietin-1

    Related
    ENSOESP00000041073.1, ENSOEST00000049077.1
Nucleotide Protein
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