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LOC128448604 torsin-1A-interacting protein 2 [ Pleuronectes platessa (European plaice) ]

Gene ID: 128448604, updated on 16-Nov-2023

Summary

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Gene symbol
LOC128448604
Gene description
torsin-1A-interacting protein 2
See related
EnsemblRapid:ENSOESG00000029947
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
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Genomic context

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See LOC128448604 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 9 NC_070634.1 (13018021..13022559)

Chromosome 9 - NC_070634.1Genomic Context describing neighboring genes Neighboring gene ferric-chelate reductase 1 Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6 Neighboring gene uncharacterized LOC128448615 Neighboring gene retinoid X receptor, gamma b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070634.1 Chromosome 9 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070634.1 Reference fPlePla1.1

    Range
    13018021..13022559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053431338.1 → XP_053287313.1  torsin-1A-interacting protein 2

    Related
    ENSOESP00000045063.1, ENSOEST00000053727.1

  2. XM_053431339.1 → XP_053287314.1  torsin-1A-interacting protein 2

    Related
    ENSOESP00000045061.1, ENSOEST00000053725.1
Nucleotide Protein
Heading Accession and Version

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