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alkbh8 alkB homolog 8, tRNA methyltransferase [ Pleuronectes platessa (European plaice) ]

Gene ID: 128440763, updated on 25-Mar-2024

Summary

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Gene symbol
alkbh8
Gene description
alkB homolog 8, tRNA methyltransferase
See related
EnsemblRapid:ENSOESG00000002903
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
Orthologs
human zebrafish all
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Genomic context

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See alkbh8 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 5 NC_070630.1 (17443238..17454760, complement)

Chromosome 5 - NC_070630.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 1, soluble, alpha 2 Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene sarcolipin Neighboring gene kelch repeat and BTB (POZ) domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070630.1 Chromosome 5 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070630.1 Reference fPlePla1.1

    Range
    17443238..17454760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053423582.1 → XP_053279557.1  alkylated DNA repair protein alkB homolog 8

    Related
    ENSOESP00000005528.1, ENSOEST00000005636.1
Nucleotide Protein
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