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traf2a Tnf receptor-associated factor 2a [ Pleuronectes platessa (European plaice) ]

Gene ID: 128437829, updated on 25-Mar-2024

Summary

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Gene symbol
traf2a
Gene description
Tnf receptor-associated factor 2a
See related
EnsemblRapid:ENSOESG00000000880
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
Orthologs
zebrafish all
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Genomic context

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See traf2a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 4 NC_070629.1 (5331177..5341847)

Chromosome 4 - NC_070629.1Genomic Context describing neighboring genes Neighboring gene IMP U3 small nucleolar ribonucleoprotein 4 Neighboring gene RAB, member RAS oncogene family-like 6b Neighboring gene tenascin Cb Neighboring gene solute carrier family 12 member 3-like Neighboring gene uncharacterized LOC128438617

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070629.1 Chromosome 4 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070629.1 Reference fPlePla1.1

    Range
    5331177..5341847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053420109.1 → XP_053276084.1  TNF receptor-associated factor 2

    Related
    ENSOESP00000001708.1, ENSOEST00000001769.1
Nucleotide Protein
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