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tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 [ Pleuronectes platessa (European plaice) ]

Gene ID: 128437364, updated on 25-Mar-2024

Summary

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Gene symbol
tab1
Gene description
TGF-beta activated kinase 1/MAP3K7 binding protein 1
See related
EnsemblRapid:ENSOESG00000021023
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
Orthologs
human zebrafish all
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Genomic context

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See tab1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 3 NC_070628.1 (4433758..4446155)

Chromosome 3 - NC_070628.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin-1 Neighboring gene intraflagellar transport 27 homolog (Chlamydomonas) Neighboring gene uncharacterized LOC128437367 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b Neighboring gene C1q and TNF related 6b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070628.1 Chromosome 3 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070628.1 Reference fPlePla1.1

    Range
    4433758..4446155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053419481.1 → XP_053275456.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Related
    ENSOESP00000030257.1, ENSOEST00000036966.1

  2. XM_053419482.1 → XP_053275457.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

  3. XM_053419484.1 → XP_053275459.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X3

    Related
    ENSOESP00000030236.1, ENSOEST00000036945.1

  4. XM_053419486.1 → XP_053275461.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X4

    Related
    ENSOESP00000030247.1, ENSOEST00000036956.1

  5. XM_053419485.1 → XP_053275460.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X4

    Related
    ENSOESP00000030239.1, ENSOEST00000036948.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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