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kirrel1a kirre like nephrin family adhesion molecule 1a [ Pleuronectes platessa (European plaice) ]

Gene ID: 128430447, updated on 25-Mar-2024

Summary

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Gene symbol
kirrel1a
Gene description
kirre like nephrin family adhesion molecule 1a
See related
EnsemblRapid:ENSOESG00000002338
Gene type
protein coding
RefSeq status
MODEL
Organism
Pleuronectes platessa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes
Orthologs
zebrafish all
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Genomic context

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See kirrel1a in Genome Data Viewer
Location:
chromosome: 23
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current fPlePla1.1 (GCF_947347685.1) 23 NC_070648.1 (11715213..11756159)

Chromosome 23 - NC_070648.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128430456 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene uncharacterized LOC128430461 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene Fc epsilon receptor IgFc epsilon receptor Ig

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070648.1 Chromosome 23 Reference fPlePla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947347685.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlePla1.1

Genomic

  1. NC_070648.1 Reference fPlePla1.1

    Range
    11715213..11756159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053416504.1 → XP_053272479.1  kin of IRRE-like protein 1a isoform X1

  2. XM_053416505.1 → XP_053272480.1  kin of IRRE-like protein 1a isoform X2

    Related
    ENSOESP00000004419.1, ENSOEST00000004525.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases