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TJP2 tight junction protein 2 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128423539, updated on 25-Mar-2024

Summary

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Gene symbol
TJP2
Gene description
tight junction protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 11 NC_070612.1 (65203474..65322570, complement)

Chromosome 11 - NC_070612.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family A member 1 Neighboring gene uncharacterized LOC128423553 Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene WAS/WASL-interacting protein family member 1-like Neighboring gene uncharacterized LOC128423554

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070612.1 Chromosome 11 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070612.1 Reference rPodRaf1.pri

    Range
    65203474..65322570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053408817.1 → XP_053264792.1  tight junction protein ZO-2 isoform X2

  2. XM_053408816.1 → XP_053264791.1  tight junction protein ZO-2 isoform X1

  3. XM_053408819.1 → XP_053264794.1  tight junction protein ZO-2 isoform X4

  4. XM_053408818.1 → XP_053264793.1  tight junction protein ZO-2 isoform X3

  5. XM_053408820.1 → XP_053264795.1  tight junction protein ZO-2 isoform X4

  6. XM_053408821.1 → XP_053264796.1  tight junction protein ZO-2 isoform X4

Nucleotide Protein
Heading Accession and Version

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