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ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128417063, updated on 25-Mar-2024

Summary

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Gene symbol
ST3GAL1
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See ST3GAL1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 7 NC_070608.1 (10371440..10482491)

Chromosome 7 - NC_070608.1Genomic Context describing neighboring genes Neighboring gene KH RNA binding domain containing, signal transduction associated 3 Neighboring gene zinc finger and AT-hook domain containing Neighboring gene N-myc downstream regulated 1 Neighboring gene cellular communication network factor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070608.1 Chromosome 7 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070608.1 Reference rPodRaf1.pri

    Range
    10371440..10482491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053395274.1 → XP_053251249.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  2. XM_053395273.1 → XP_053251248.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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