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PPP1R3D protein phosphatase 1 regulatory subunit 3D [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128416527, updated on 25-Mar-2024

Summary

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Gene symbol
PPP1R3D
Gene description
protein phosphatase 1 regulatory subunit 3D
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See PPP1R3D in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 6 NC_070607.1 (87342705..87344021)

Chromosome 6 - NC_070607.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128416526 Neighboring gene synaptonemal complex protein 2 Neighboring gene family with sequence similarity 217 member B Neighboring gene cadherin 26 Neighboring gene cadherin 4 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070607.1 Chromosome 6 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein phosphatase type 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 3D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070607.1 Reference rPodRaf1.pri

    Range
    87342705..87344021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053394408.1 → XP_053250383.1  protein phosphatase 1 regulatory subunit 3D

Nucleotide Protein
Heading Accession and Version

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