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LOC128415278 torsin-1A-interacting protein 1-like [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128415278, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128415278
Gene description
torsin-1A-interacting protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
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Genomic context

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See LOC128415278 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 6 NC_070607.1 (6348767..6359280)

Chromosome 6 - NC_070607.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin 1A interacting protein 2 Neighboring gene centrosomal protein 350 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070607.1 Chromosome 6 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070607.1 Reference rPodRaf1.pri

    Range
    6348767..6359280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053391304.1 → XP_053247279.1  torsin-1A-interacting protein 1-like

Nucleotide Protein
Heading Accession and Version

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