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EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128414455, updated on 25-Mar-2024

Summary

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Gene symbol
EHHADH
Gene description
enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See EHHADH in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 5 NC_070606.1 (63257451..63281600, complement)

Chromosome 5 - NC_070606.1Genomic Context describing neighboring genes Neighboring gene VPS8 subunit of CORVET complex Neighboring gene chromosome 5 C3orf70 homolog Neighboring gene mitogen-activated protein kinase kinase kinase 13 Neighboring gene transmembrane protein 41A Neighboring gene SUMO specific peptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070606.1 Chromosome 5 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal bifunctional enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070606.1 Reference rPodRaf1.pri

    Range
    63257451..63281600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053389766.1 → XP_053245741.1  peroxisomal bifunctional enzyme

Nucleotide Protein
Heading Accession and Version

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