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INPP5A inositol polyphosphate-5-phosphatase A [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128414095, updated on 25-Mar-2024

Summary

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Gene symbol
INPP5A
Gene description
inositol polyphosphate-5-phosphatase A
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See INPP5A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 5 NC_070606.1 (40896443..41129032, complement)

Chromosome 5 - NC_070606.1Genomic Context describing neighboring genes Neighboring gene vertebrate ancient opsin-like Neighboring gene NK6 homeobox 2 Neighboring gene uncharacterized LOC128414096 Neighboring gene PWWP domain containing 2B Neighboring gene leucine rich repeat containing 27

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070606.1 Chromosome 5 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate-5-phosphatase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070606.1 Reference rPodRaf1.pri

    Range
    40896443..41129032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053388823.1 → XP_053244798.1  inositol polyphosphate-5-phosphatase A isoform X1

  2. XM_053388825.1 → XP_053244800.1  inositol polyphosphate-5-phosphatase A isoform X3

  3. XM_053388824.1 → XP_053244799.1  inositol polyphosphate-5-phosphatase A isoform X2

  4. XM_053388826.1 → XP_053244801.1  inositol polyphosphate-5-phosphatase A isoform X4

Nucleotide Protein
Heading Accession and Version

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