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LOC128412742 beta-1,4-galactosyltransferase 3-like [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128412742, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128412742
Gene description
beta-1,4-galactosyltransferase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
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Genomic context

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See LOC128412742 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 4 NC_070605.1 (30828198..30843910, complement)

Chromosome 4 - NC_070605.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 9 Neighboring gene beta-1,4-galactosyltransferase 4 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like Neighboring gene transfer RNA asparagine (anticodon AUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070605.1 Chromosome 4 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070605.1 Reference rPodRaf1.pri

    Range
    30828198..30843910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053386062.1 → XP_053242037.1  beta-1,4-galactosyltransferase 3-like isoform X2

  2. XM_053386058.1 → XP_053242033.1  beta-1,4-galactosyltransferase 3-like isoform X1

  3. XM_053386060.1 → XP_053242035.1  beta-1,4-galactosyltransferase 3-like isoform X1

  4. XM_053386061.1 → XP_053242036.1  beta-1,4-galactosyltransferase 3-like isoform X1

  5. XM_053386059.1 → XP_053242034.1  beta-1,4-galactosyltransferase 3-like isoform X1

Nucleotide Protein
Heading Accession and Version

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