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HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128411512, updated on 25-Mar-2024

Summary

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Gene symbol
HADHB
Gene description
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See HADHB in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 3 NC_070604.1 (123295420..123319972, complement)

Chromosome 3 - NC_070604.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128411520 Neighboring gene sterile alpha motif domain-containing protein 12-like Neighboring gene selenoprotein I Neighboring gene adhesion G protein-coupled receptor F3 Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha Neighboring gene GRB2 associated regulator of MAPK1 subtype 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070604.1 Chromosome 3 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trifunctional enzyme subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070604.1 Reference rPodRaf1.pri

    Range
    123295420..123319972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053383879.1 → XP_053239854.1  trifunctional enzyme subunit beta, mitochondrial isoform X1

  2. XM_053383880.1 → XP_053239855.1  trifunctional enzyme subunit beta, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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