U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128407204, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
ORMDL2
Gene description
ORMDL sphingolipid biosynthesis regulator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ORMDL2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 2 NC_070603.1 (22240543..22412223, complement)

Chromosome 2 - NC_070603.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128407207 Neighboring gene histone-lysine N-methyltransferase 2D-like Neighboring gene uncharacterized LOC128407205 Neighboring gene SAP domain containing ribonucleoprotein Neighboring gene growth differentiation factor 11 Neighboring gene transmembrane protein 198-like Neighboring gene DnaJ heat shock protein family (Hsp40) member C14 Neighboring gene uncharacterized LOC128407206 Neighboring gene matrix metallopeptidase 19 Neighboring gene PYM homolog 1, exon junction complex associated factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_070603.1 Chromosome 2 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ORM1-like protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070603.1 Reference rPodRaf1.pri

    Range
    22240543..22412223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053375276.1 → XP_053231251.1  ORM1-like protein 2

  2. XM_053375275.1 → XP_053231250.1  ORM1-like protein 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.