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L1CAM L1 cell adhesion molecule [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128404637, updated on 25-Mar-2024

Summary

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Gene symbol
L1CAM
Gene description
L1 cell adhesion molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See L1CAM in Genome Data Viewer
Location:
chromosome: 17
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 17 NC_070618.1 (38688083..38797303, complement)

Chromosome 17 - NC_070618.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene signal sequence receptor subunit 4 Neighboring gene PDZ domain containing 4 Neighboring gene EKC/KEOPS complex subunit LAGE3-like Neighboring gene arginine vasopressin receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070618.1 Chromosome 17 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070618.1 Reference rPodRaf1.pri

    Range
    38688083..38797303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053370375.1 → XP_053226350.1  neural cell adhesion molecule L1 isoform X5

  2. XM_053370372.1 → XP_053226347.1  neural cell adhesion molecule L1 isoform X2

  3. XM_053370376.1 → XP_053226351.1  neural cell adhesion molecule L1 isoform X6

  4. XM_053370374.1 → XP_053226349.1  neural cell adhesion molecule L1 isoform X4

  5. XM_053370373.1 → XP_053226348.1  neural cell adhesion molecule L1 isoform X3

  6. XM_053370371.1 → XP_053226346.1  neural cell adhesion molecule L1 isoform X1

  7. XM_053370377.1 → XP_053226352.1  neural cell adhesion molecule L1 isoform X7

Nucleotide Protein
Heading Accession and Version

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