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INPP5J inositol polyphosphate-5-phosphatase J [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128403911, updated on 25-Mar-2024

Summary

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Gene symbol
INPP5J
Gene description
inositol polyphosphate-5-phosphatase J
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See INPP5J in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 16 NC_070617.1 (24647211..24687381)

Chromosome 16 - NC_070617.1Genomic Context describing neighboring genes Neighboring gene smoothelin Neighboring gene selenoprotein M Neighboring gene transfer RNA isoleucine (anticodon GAU) Neighboring gene phospholipase A2 group III Neighboring gene 2'-5'-oligoadenylate synthase 1A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070617.1 Chromosome 16 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070617.1 Reference rPodRaf1.pri

    Range
    24647211..24687381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053369080.1 → XP_053225055.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1

  2. XM_053369081.1 → XP_053225056.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X2

  3. XM_053369082.1 → XP_053225057.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X3

Nucleotide Protein
Heading Accession and Version

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