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COLGALT1 collagen beta(1-O)galactosyltransferase 1 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128403794, updated on 25-Mar-2024

Summary

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Gene symbol
COLGALT1
Gene description
collagen beta(1-O)galactosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See COLGALT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 2 NC_070603.1 (403663..437501, complement)

Chromosome 2 - NC_070603.1Genomic Context describing neighboring genes Neighboring gene 1-phosphatidylinositol phosphodiesterase-like Neighboring gene HIV-1 Tat interactive protein 2 Neighboring gene 6-phosphogluconolactonase Neighboring gene solute carrier family 27 member 1 Neighboring gene nucleoredoxin like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070603.1 Chromosome 2 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070603.1 Reference rPodRaf1.pri

    Range
    403663..437501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053368887.1 → XP_053224862.1  procollagen galactosyltransferase 1 isoform X2

  2. XM_053368878.1 → XP_053224853.1  procollagen galactosyltransferase 1 isoform X1

RNA

  1. XR_008328007.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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