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GAL3ST1 galactose-3-O-sulfotransferase 1 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128403573, updated on 25-Mar-2024

Summary

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Gene symbol
GAL3ST1
Gene description
galactose-3-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See GAL3ST1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 16 NC_070617.1 (24028267..24059967, complement)

Chromosome 16 - NC_070617.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128403613 Neighboring gene mitochondrial fission process 1 Neighboring gene pescadillo ribosomal biogenesis factor 1 Neighboring gene transcobalamin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070617.1 Chromosome 16 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070617.1 Reference rPodRaf1.pri

    Range
    24028267..24059967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053368448.1 → XP_053224423.1  galactosylceramide sulfotransferase isoform X3

  2. XM_053368456.1 → XP_053224431.1  galactosylceramide sulfotransferase isoform X4

  3. XM_053368454.1 → XP_053224429.1  galactosylceramide sulfotransferase isoform X4

  4. XM_053368447.1 → XP_053224422.1  galactosylceramide sulfotransferase isoform X2

  5. XM_053368453.1 → XP_053224428.1  galactosylceramide sulfotransferase isoform X4

  6. XM_053368457.1 → XP_053224432.1  galactosylceramide sulfotransferase isoform X5

  7. XM_053368449.1 → XP_053224424.1  galactosylceramide sulfotransferase isoform X4

  8. XM_053368446.1 → XP_053224421.1  galactosylceramide sulfotransferase isoform X1

  9. XM_053368450.1 → XP_053224425.1  galactosylceramide sulfotransferase isoform X4

  10. XM_053368451.1 → XP_053224426.1  galactosylceramide sulfotransferase isoform X4

  11. XM_053368452.1 → XP_053224427.1  galactosylceramide sulfotransferase isoform X4

  12. XM_053368455.1 → XP_053224430.1  galactosylceramide sulfotransferase isoform X4

Nucleotide Protein
Heading Accession and Version

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