U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

OGDH oxoglutarate dehydrogenase [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128402449, updated on 25-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
OGDH
Gene description
oxoglutarate dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See OGDH in Genome Data Viewer
Location:
chromosome: 15
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 15 NC_070616.1 (35291695..35350092, complement)

Chromosome 15 - NC_070616.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A Neighboring gene zinc finger MIZ-type containing 2 Neighboring gene transcription factor IIIB 50 kDa subunit-like Neighboring gene adhesion G protein-coupled receptor A2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_070616.1 Chromosome 15 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
2-oxoglutarate dehydrogenase complex component E1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070616.1 Reference rPodRaf1.pri

    Range
    35291695..35350092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053366570.1 → XP_053222545.1  2-oxoglutarate dehydrogenase complex component E1 isoform X3

  2. XM_053366568.1 → XP_053222543.1  2-oxoglutarate dehydrogenase complex component E1 isoform X1

  3. XM_053366571.1 → XP_053222546.1  2-oxoglutarate dehydrogenase complex component E1 isoform X4

  4. XM_053366569.1 → XP_053222544.1  2-oxoglutarate dehydrogenase complex component E1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.