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PLD4 phospholipase D family member 4 [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128402312, updated on 25-Mar-2024

Summary

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Gene symbol
PLD4
Gene description
phospholipase D family member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See PLD4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 1 NC_070602.1 (12629787..12636895)

Chromosome 1 - NC_070602.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 42 Neighboring gene centrosomal protein 170B Neighboring gene protein AHNAK2-like Neighboring gene inverted formin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070602.1 Chromosome 1 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exonuclease PLD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070602.1 Reference rPodRaf1.pri

    Range
    12629787..12636895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053366287.1 → XP_053222262.1  5'-3' exonuclease PLD4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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