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PIGB phosphatidylinositol glycan anchor biosynthesis class B [ Podarcis raffonei (Aeolian wall lizard) ]

Gene ID: 128402181, updated on 25-Mar-2024

Summary

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Gene symbol
PIGB
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis raffonei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See PIGB in Genome Data Viewer
Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current rPodRaf1.pri (GCF_027172205.1) 14 NC_070615.1 (6698078..6711564, complement)

Chromosome 14 - NC_070615.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 4 Neighboring gene cell cycle progression 1 Neighboring gene PIGB opposite strand 1 Neighboring gene RAB27A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070615.1 Chromosome 14 Reference rPodRaf1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027172205.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rPodRaf1.pri

Genomic

  1. NC_070615.1 Reference rPodRaf1.pri

    Range
    6698078..6711564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053366156.1 → XP_053222131.1  GPI mannosyltransferase 3 isoform X1

  2. XM_053366159.1 → XP_053222134.1  GPI mannosyltransferase 3 isoform X1

  3. XM_053366158.1 → XP_053222133.1  GPI mannosyltransferase 3 isoform X1

  4. XM_053366160.1 → XP_053222135.1  GPI mannosyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

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