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sgcg sarcoglycan, gamma [ Scomber japonicus (chub mackerel) ]

Gene ID: 128360445, updated on 25-Mar-2024

Summary

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Gene symbol
sgcg
Gene description
sarcoglycan, gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Scomber japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Scomber
Orthologs
human zebrafish all
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Genomic context

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See sgcg in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current fScoJap1.pri (GCF_027409825.1) 6 NC_070583.1 (14749671..14760303, complement)

Chromosome 6 - NC_070583.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily, member 19 Neighboring gene sacsin molecular chaperone Neighboring gene ribosomal protein S25 Neighboring gene trafficking protein particle complex subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070583.1 Chromosome 6 Reference fScoJap1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027409825.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fScoJap1.pri

Genomic

  1. NC_070583.1 Reference fScoJap1.pri

    Range
    14749671..14760303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053320879.1 → XP_053176854.1  gamma-sarcoglycan

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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