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LOC128356193 cytokine-inducible SH2-containing protein-like [ Scomber japonicus (chub mackerel) ]

Gene ID: 128356193, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128356193
Gene description
cytokine-inducible SH2-containing protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Scomber japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Scomber
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Genomic context

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See LOC128356193 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current fScoJap1.pri (GCF_027409825.1) 3 NC_070580.1 (19711521..19713801, complement)

Chromosome 3 - NC_070580.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 43 Neighboring gene transforming protein RhoA Neighboring gene twinfilin-2-like Neighboring gene WD repeat-containing protein 82-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_070580.1 Chromosome 3 Reference fScoJap1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027409825.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fScoJap1.pri

Genomic

  1. NC_070580.1 Reference fScoJap1.pri

    Range
    19711521..19713801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053316668.1 → XP_053172643.1  cytokine-inducible SH2-containing protein-like

  2. XM_053316667.1 → XP_053172642.1  cytokine-inducible SH2-containing protein-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases