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PNPLA4 patatin like phospholipase domain containing 4 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128350295, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 3 NC_069659.1 (121865192..121905542)

Chromosome 3 - NC_069659.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128350935 Neighboring gene uncharacterized LOC128350936 Neighboring gene uncharacterized LOC128350297 Neighboring gene uncharacterized LOC128350296 Neighboring gene steroid sulfatase Neighboring gene pseudouridine 5'-phosphatase Neighboring gene neuroligin 4 X-linked

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069659.1 Chromosome 3 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069659.1 Reference rHemCap1.1.pri

    Range
    121865192..121905542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053308381.1 → XP_053164356.1  patatin-like phospholipase domain-containing protein 4 isoform X3

  2. XM_053308371.1 → XP_053164346.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  3. XM_053308369.1 → XP_053164344.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  4. XM_053308370.1 → XP_053164345.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  5. XM_053308374.1 → XP_053164349.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  6. XM_053308373.1 → XP_053164348.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  7. XM_053308380.1 → XP_053164355.1  patatin-like phospholipase domain-containing protein 4 isoform X3

  8. XM_053308378.1 → XP_053164353.1  patatin-like phospholipase domain-containing protein 4 isoform X2

  9. XM_053308375.1 → XP_053164350.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  10. XM_053308376.1 → XP_053164351.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  11. XM_053308372.1 → XP_053164347.1  patatin-like phospholipase domain-containing protein 4 isoform X1

  12. XM_053308379.1 → XP_053164354.1  patatin-like phospholipase domain-containing protein 4 isoform X3

  13. XM_053308382.1 → XP_053164357.1  patatin-like phospholipase domain-containing protein 4 isoform X4

Nucleotide Protein
Heading Accession and Version

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