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CHST13 carbohydrate sulfotransferase 13 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128342529, updated on 25-Mar-2024

Summary

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Gene symbol
CHST13
Gene description
carbohydrate sulfotransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See CHST13 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 2 NC_069658.1 (298566912..298638549, complement)

Chromosome 2 - NC_069658.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128344577 Neighboring gene uncharacterized LOC128344576 Neighboring gene solute carrier family 41 member 3 Neighboring gene uncharacterized LOC128342526 Neighboring gene uncharacterized LOC128342530 Neighboring gene thioredoxin reductase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069658.1 Chromosome 2 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069658.1 Reference rHemCap1.1.pri

    Range
    298566912..298638549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053289908.1 → XP_053145883.1  carbohydrate sulfotransferase 13 isoform X2

  2. XM_053289907.1 → XP_053145882.1  carbohydrate sulfotransferase 13 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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