U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128342243, updated on 25-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
B4GALNT1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B4GALNT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 2 NC_069658.1 (197452246..197612069, complement)

Chromosome 2 - NC_069658.1Genomic Context describing neighboring genes Neighboring gene transcription factor Sp5-like Neighboring gene uncharacterized LOC128342402 Neighboring gene solute carrier family 26 member 10-like Neighboring gene uncharacterized LOC128342244 Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like Neighboring gene uncharacterized LOC128346992

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_069658.1 Chromosome 2 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069658.1 Reference rHemCap1.1.pri

    Range
    197452246..197612069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053289367.1 → XP_053145342.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

  2. XM_053289366.1 → XP_053145341.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

  3. XM_053289374.1 → XP_053145349.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  4. XM_053289378.1 → XP_053145353.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  5. XM_053289370.1 → XP_053145345.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X4

  6. XM_053289377.1 → XP_053145352.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  7. XM_053289382.1 → XP_053145357.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  8. XM_053289379.1 → XP_053145354.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  9. XM_053289372.1 → XP_053145347.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X6

  10. XM_053289376.1 → XP_053145351.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  11. XM_053289373.1 → XP_053145348.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X7

  12. XM_053289383.1 → XP_053145358.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  13. XM_053289371.1 → XP_053145346.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X5

  14. XM_053289380.1 → XP_053145355.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X8

  15. XM_053289368.1 → XP_053145343.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.