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SPTSSA serine palmitoyltransferase small subunit A [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128341087, updated on 19-Jun-2024

Summary

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Gene symbol
SPTSSA
Gene description
serine palmitoyltransferase small subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See SPTSSA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 1 NC_069657.1 (55168859..55185635)

Chromosome 1 - NC_069657.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128341089 Neighboring gene uncharacterized LOC128341083 Neighboring gene sorting nexin 6 Neighboring gene E2F associated phosphoprotein Neighboring gene uncharacterized LOC128339270 Neighboring gene egl-9 family hypoxia inducible factor 3 Neighboring gene neuronal PAS domain protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069657.1 Chromosome 1 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase small subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069657.1 Reference rHemCap1.1.pri

    Range
    55168859..55185635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053287170.1 → XP_053143145.1  serine palmitoyltransferase small subunit A

Nucleotide Protein
Heading Accession and Version

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