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LAMA2 laminin subunit alpha 2 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128340685, updated on 25-Mar-2024

Summary

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Gene symbol
LAMA2
Gene description
laminin subunit alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See LAMA2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
71
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 1 NC_069657.1 (345764238..346523934)

Chromosome 1 - NC_069657.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type K Neighboring gene uncharacterized LOC128341324 Neighboring gene vesicular inhibitory amino acid transporter-like Neighboring gene uncharacterized LOC128340732 Neighboring gene uncharacterized LOC128340727 Neighboring gene Rho GTPase activating protein 18 Neighboring gene transmembrane protein 244

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069657.1 Chromosome 1 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069657.1 Reference rHemCap1.1.pri

    Range
    345764238..346523934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053286200.1 → XP_053142175.1  laminin subunit alpha-2 isoform X5

  2. XM_053286222.1 → XP_053142197.1  laminin subunit alpha-2 isoform X8

  3. XM_053286157.1 → XP_053142132.1  laminin subunit alpha-2 isoform X1

  4. XM_053286175.1 → XP_053142150.1  laminin subunit alpha-2 isoform X4

  5. XM_053286165.1 → XP_053142140.1  laminin subunit alpha-2 isoform X3

  6. XM_053286162.1 → XP_053142137.1  laminin subunit alpha-2 isoform X2

  7. XM_053286184.1 → XP_053142159.1  laminin subunit alpha-2 isoform X5

  8. XM_053286192.1 → XP_053142167.1  laminin subunit alpha-2 isoform X5

  9. XM_053286208.1 → XP_053142183.1  laminin subunit alpha-2 isoform X6

  10. XM_053286218.1 → XP_053142193.1  laminin subunit alpha-2 isoform X7

  11. XM_053286231.1 → XP_053142206.1  laminin subunit alpha-2 isoform X9

RNA

  1. XR_008313916.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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