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LPIN1 lipin 1 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128340481, updated on 25-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 1 NC_069657.1 (279735284..279861098, complement)

Chromosome 1 - NC_069657.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128340946 Neighboring gene uncharacterized LOC128340945 Neighboring gene uncharacterized LOC128340483 Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene uncharacterized LOC128340485 Neighboring gene E2F transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069657.1 Chromosome 1 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069657.1 Reference rHemCap1.1.pri

    Range
    279735284..279861098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053285629.1 → XP_053141604.1  phosphatidate phosphatase LPIN1 isoform X5

  2. XM_053285624.1 → XP_053141599.1  phosphatidate phosphatase LPIN1 isoform X3

  3. XM_053285627.1 → XP_053141602.1  phosphatidate phosphatase LPIN1 isoform X5

  4. XM_053285623.1 → XP_053141598.1  phosphatidate phosphatase LPIN1 isoform X2

  5. XM_053285628.1 → XP_053141603.1  phosphatidate phosphatase LPIN1 isoform X5

  6. XM_053285625.1 → XP_053141600.1  phosphatidate phosphatase LPIN1 isoform X4

  7. XM_053285633.1 → XP_053141608.1  phosphatidate phosphatase LPIN1 isoform X5

  8. XM_053285622.1 → XP_053141597.1  phosphatidate phosphatase LPIN1 isoform X1

  9. XM_053285632.1 → XP_053141607.1  phosphatidate phosphatase LPIN1 isoform X5

  10. XM_053285631.1 → XP_053141606.1  phosphatidate phosphatase LPIN1 isoform X5

  11. XM_053285626.1 → XP_053141601.1  phosphatidate phosphatase LPIN1 isoform X5

  12. XM_053285634.1 → XP_053141609.1  phosphatidate phosphatase LPIN1 isoform X6

RNA

  1. XR_008313745.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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