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LOC128338747 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128338747, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128338747
Gene description
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
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Genomic context

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See LOC128338747 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 17 NC_069673.1 (15402299..15452697, complement)

Chromosome 17 - NC_069673.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 13 Neighboring gene dual specificity testis-specific protein kinase 1-like Neighboring gene dipeptidyl peptidase 7 Neighboring gene ficolin-2-like Neighboring gene translation initiation factor IF-2-like Neighboring gene DAB2 interacting protein Neighboring gene tubulin tyrosine ligase like 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069673.1 Chromosome 17 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069673.1 Reference rHemCap1.1.pri

    Range
    15402299..15452697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053281604.1 → XP_053137579.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  2. XM_053281601.1 → XP_053137576.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  3. XM_053281607.1 → XP_053137582.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X2

  4. XM_053281599.1 → XP_053137574.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  5. XM_053281602.1 → XP_053137577.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  6. XM_053281606.1 → XP_053137581.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  7. XM_053281600.1 → XP_053137575.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

  8. XM_053281605.1 → XP_053137580.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases