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PLCB3 phospholipase C beta 3 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128337188, updated on 25-Mar-2024

Summary

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Gene symbol
PLCB3
Gene description
phospholipase C beta 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See PLCB3 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 14 NC_069670.1 (11321312..11380641, complement)

Chromosome 14 - NC_069670.1Genomic Context describing neighboring genes Neighboring gene glyoxal reductase-like Neighboring gene sodium/calcium exchanger 1-like Neighboring gene BCL2 associated agonist of cell death Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14B Neighboring gene FKBP prolyl isomerase 2 Neighboring gene vascular endothelial growth factor B Neighboring gene DnaJ heat shock protein family (Hsp40) member C4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069670.1 Chromosome 14 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069670.1 Reference rHemCap1.1.pri

    Range
    11321312..11380641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053277911.1 → XP_053133886.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X3

  2. XM_053277910.1 → XP_053133885.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X3

  3. XM_053277909.1 → XP_053133884.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X3

  4. XM_053277908.1 → XP_053133883.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X2

  5. XM_053277906.1 → XP_053133881.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1

  6. XM_053277912.1 → XP_053133887.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X4

Nucleotide Protein
Heading Accession and Version

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