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PLA2G6 phospholipase A2 group VI [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128326928, updated on 25-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 5 NC_069661.1 (217655274..217706447)

Chromosome 5 - NC_069661.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128326820 Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069661.1 Chromosome 5 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069661.1 Reference rHemCap1.1.pri

    Range
    217655274..217706447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053254822.1 → XP_053110797.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

  2. XM_053254821.1 → XP_053110796.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

  3. XM_053254824.1 → XP_053110799.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

  4. XM_053254825.1 → XP_053110800.1  85/88 kDa calcium-independent phospholipase A2 isoform X4

  5. XM_053254820.1 → XP_053110795.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

  6. XM_053254823.1 → XP_053110798.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

Nucleotide Protein
Heading Accession and Version

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