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GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128323558, updated on 25-Mar-2024

Summary

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Gene symbol
GPLD1
Gene description
glycosylphosphatidylinositol specific phospholipase D1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See GPLD1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 4 NC_069660.1 (220506247..220568316, complement)

Chromosome 4 - NC_069660.1Genomic Context describing neighboring genes Neighboring gene neurensin 1 Neighboring gene doublecortin domain containing 2 Neighboring gene magnesium transporter MRS2 Neighboring gene uncharacterized LOC128323562 Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene KIAA0319 ortholog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069660.1 Chromosome 4 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: phosphatidylinositol-glycan-specific phospholipase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069660.1 Reference rHemCap1.1.pri

    Range
    220506247..220568316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053246901.1 → XP_053102876.1  LOW QUALITY PROTEIN: phosphatidylinositol-glycan-specific phospholipase D

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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